PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008230522.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 387aa    MW: 42550.3 Da    PI: 5.2725
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008230522.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.71e-31551971128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 
                     lp+G++F+P+d el+ e+L++k+   +    + ++e+i+++d    iy+ +P +Lp   k++ ++ +fF+k+ ++yatg+rk+r+        ++
  XP_008230522.1  55 LPAGVKFDPSDAELL-EHLAAKCGVGNskphMFIDEFIPTLDgdngIYYDHPANLP-GSKNDGSSFHFFHKTINAYATGHRKRRKvdchrslaAE 147
                     799************.999999876664555444456777766677**********.556778899******************86888888877 PP

             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     + +W++tgk+k++++ +g ++g+kk++v+y  +++ +k+ k++Wvmh+y+l
  XP_008230522.1 148 HVRWHKTGKTKPIME-NGVQKGCKKIMVLYksSKKGSKADKSNWVMHQYHL 197
                     999************.999***********4334667888*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-3640216IPR003441NAC domain
PROSITE profilePS5100531.55255216IPR003441NAC domain
PfamPF023652.0E-1356197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MARAWLINSR GLANKVKNAA RSSAYQIKDC GANRDCPNCH FVIDNSDVLS EWPGLPAGVK  60
FDPSDAELLE HLAAKCGVGN SKPHMFIDEF IPTLDGDNGI YYDHPANLPG SKNDGSSFHF  120
FHKTINAYAT GHRKRRKVDC HRSLAAEHVR WHKTGKTKPI MENGVQKGCK KIMVLYKSSK  180
KGSKADKSNW VMHQYHLGTE DGEKEGEYVV SKIFYQQHKQ SETNDNNLVI EDDVNALGTS  240
PRTPITSAPN PPRPGKSVGC DDVPDEDVLH SSAKEAELVP GTQFEDNIGD TTWLAGESQA  300
DENCDLDCLE DTLLCKETFN SSTLLNGSFA DRITDFPSNI YGVTGNSSTS CGIGDLENID  360
LGTPPDFQLA DLQFGSQESL LGWLDRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008230522.10.0PREDICTED: NAC domain-containing protein 8
SwissprotQ6NQK27e-86NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM5WSN80.0M5WSN8_PRUPE; Uncharacterized protein
STRINGPOPTR_0001s35490.11e-152(Populus trichocarpa)
STRINGPGSC0003DMT4000328291e-153(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75723047
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.11e-93NAC domain containing protein 44